BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A01SP1|AL428139
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig442 1851 0.0
>3x_Contig442
Length = 2059
Score = 1851 bits (930), Expect = 0.0
Identities = 981/996 (98%), Gaps = 6/996 (0%)
Strand = Plus / Plus
Query: 1 gatctcttttctctatcgtagaaggattcaggcccaacgaa-tgctaactctatgcttgt 59
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 33 gatctcttttctctatcgtagaaggattcaggcccaacgaagtgc-aactctatgcttgt 91
Query: 60 atctggaatcaaatattgtaattgtttccaaacgtgacccggtagctgtgcttcggcacg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 atctggaatcaaatattgtaattgtttccaaacgtgacccggtagctgtgcttcggcacg 151
Query: 120 agttccaagaataaatattctgataggtgtatcctgaccagctctaaatctaccagattg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 agttccaagaataaatattctgataggtgtatcctgaccagctctaaatctaccagattg 211
Query: 180 ttctgggtacaacgtgtaacgtagagcagctaacgacttcaaaccttccaaagttatggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ttctgggtacaacgtgtaacgtagagcagctaacgacttcaaaccttccaaagttatggg 271
Query: 240 acccttagggttcaaagagtacggagagtactggtgtagcacagatccaatcgtgattgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 acccttagggttcaaagagtacggagagtactggtgtagcacagatccaatcgtgattgg 331
Query: 300 ataactcaacatcttcgttactgcagctagctgaaactctgtatccatagaataawacga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 332 ataactcaacatcttcgttactgcagctagctgaaactctgtatccatagaataaaacga 391
Query: 360 acgcgtgtwaaagaacaaatcccagttgctcatgttaaccatcctatcatagtcttggtc 419
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 acgcgtgtaaaagaacaaatcccagttgctcatgttaaccatcctatcatagtcttggtc 451
Query: 420 ttgtgggaaatcaaactcgggaaatggcctacccgatctaagatcatgctcgtatatgtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttgtgggaaatcaaactcgggaaatggcctacccgatctaagatcatgctcgtatatgtt 511
Query: 480 aactttcttcaataactcatatctcttgctcttatggtactccgtgtccttttcccaggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aactttcttcaataactcatatctcttgctcttatggtactccgtgtccttttcccaggc 571
Query: 540 ctctcttgaatggtgagtgggaatccctgatagtgggcatgtgaactggatatccttatg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctctcttgaatggtgagtgggaatccctgatagtgggcatgtgaactggatatccttatg 631
Query: 600 cgtcactggacatgttgccatggccttaatccttgctgcacgctcgcgcaaatcgggcga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cgtcactggacatgttgccatggccttaatccttgctgcacgctcgcgcaaatcgggcga 691
Query: 660 aggagattggtcccatggatggaacctattctctggggtaggatcgtccggcgaag--ag 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 692 aggagattggtcccatggatggaacctattctctggggtaggatcgtccggcgaagccgg 751
Query: 718 ggnatccaaccccaaagcattacgaacgaaccccataatgggacgagtcatgggcttagc 777
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aggatccaaccccaaagcattacgaacgaaccccataatgggacgagtcatgggcttagc 811
Query: 778 ccggtaaaccactggtgttctcgaagcaagcatcgttattccctttagaatcaaaccaaa 837
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 812 ccggtaaaccactggtgttctcgaagcaagcatcgttattccc-ttagaatcaaaccaaa 870
Query: 838 aagaaatgaaagawaaaactgattaawccagaaaacaaaggcgcaaagatagcttaaacc 897
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 871 aagaaatgaaagaaaaaactgattaaaccagaaaacaaaggcgcaaagatagcttaaacc 930
Query: 898 tctagtacacttcgcctactaadatctgatatccgatacctgatatatgatgtactatta 957
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 931 tctagtacacttcgcctactaaaatctgatatccgatacctgatatatgatgtactatta 990
Query: 958 accaaagaacaccgattgtwcc-tctgaactgcatc 992
||||||||||||||||||| || |||||||||||||
Sbjct: 991 accaaagaacaccgattgtaccttctgaactgcatc 1026
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5233
Number of Sequences: 1807
Number of extensions: 5233
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)